Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTAGAGGCTGGAATAGAGATTCT&AGAGCTTTGGTCTATGACCTCTGAT
((((((((((((.(((((.((((&))))))))).)))).).))))))).
Details
MiRNAhsa-miR-6866-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1359,1384
Score0.846
Seed1
Au0.662
Energy-18.0
Binding len25
Me-5.227
Phylopstem3.1026568000000005
Phylopflank2.8498518350000004
Longest consecutive pairings9
Position of longest consecutive pairings16
Pairings in 3prime end7
PositionCDS
2D Structure