Details of Duplex


2D Structure dot-bracket from RNAduplex"
GTGAGTAGTGGCGCGCGGCGGC&GCCGCCGGCGGGACTGGTCT
..((.((((..(((.(((((((&))))))))))..)))).)).
Details
MiRNAhsa-miR-6869-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site18,38
Score0.846
Seed0
Au0.313
Energy-27.5
Binding len20
Me-13.879
Phylopstem0.9363381000000001
Phylopflank0.281249315
Longest consecutive pairings10
Position of longest consecutive pairings10
Pairings in 3prime end7
Position5UTR
2D Structure