Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCTCGCATCAGGAGGCAAGG&CCAAACCTCCAGATGTAGAC
(((.(((((.(((((...((&))...))))).)))))))).
Details
MiRNAhsa-miR-6872-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site749,769
Score0.846
Seed0
Au0.603
Energy-17.2
Binding len20
Me-8.445
Phylopstem4.451672
Phylopflank4.292065454999999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure