Details of Duplex


2D Structure dot-bracket from RNAduplex"
CCCATGCCTCCTGCCGCGGTC&GGCCGCCGGCGGGACTGGTCTGAAGAGACGCGGGGA
(((..((((((((((((((((&)))))).)))))))..))).............))).
Details
MiRNAhsa-miR-6872-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site17,53
Score0.846
Seed0
Au0.324
Energy-27.9
Binding len36
Me-11.089
Phylopstem0.21068804736842106
Phylopflank0.2974359510714287
Longest consecutive pairings7
Position of longest consecutive pairings22
Pairings in 3prime end8
Position5UTR
2D Structure