Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGCTGTCTGTGTTTTCCTTCTCAG&GAGAATGGGAGGCACCTCAGATTCTTAATCCAGCA
.(((((((((((((((((((((..&))))).)))))))))...))).........)))).
Details
MiRNAhsa-miR-6876-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1136,1171
Score0.923
Seed1
Au0.485
Energy-22.3
Binding len35
Me-3.793
Phylopstem2.6552483558823523
Phylopflank4.3758007375000005
Longest consecutive pairings9
Position of longest consecutive pairings20
Pairings in 3prime end6
PositionCDS
2D Structure