Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGGCCGAAGGGTGGAAGCTGC&GCCGCAAGAGAGATAATCAATATGCATTTCCAAGCCTTTTGGCTA
..((((((((((((((((.(((&.))))))))..))))))))))).
Details
MiRNAhsa-miR-6877-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site100,145
Score1.0
Seed1
Au0.647
Energy-24.4
Binding len23
Me-4.957
Phylopstem0.20422925555555554
Phylopflank1.0980421912499998
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure