Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGGAGAAAGCTAGAAGCTGAAG&TTCAAGTGTTGTTAAACCTGCTGGCTGGCTTGATGATGAACCAAAATTTATCCCTG
(((((..(((((((.(((.....&.)))..)))))))...................))))).
Details
MiRNAhsa-miR-6878-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1035,1091
Score0.846
Seed0
Au0.559
Energy-17.9
Binding len38
Me-8.118
Phylopstem5.499402428571428
Phylopflank4.657760931250001
Longest consecutive pairings7
Position of longest consecutive pairings25
Pairings in 3prime end3
PositionCDS
2D Structure