Details of Duplex


2D Structure dot-bracket from RNAduplex"
CAGGGCAGGGAAGGTGGGAGAG&CTTCTGCCGTCAAACCAGAAGACTGGGATGAAAGTGAACCTGCCCA
..(((((((((.((((((((..&)))))))).))...........................))))))).
Details
MiRNAhsa-miR-6879-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site980,1026
Score0.923
Seed1
Au0.574
Energy-23.7
Binding len46
Me-8.304
Phylopstem4.703350138888887
Phylopflank5.03795975625
Longest consecutive pairings8
Position of longest consecutive pairings38
Pairings in 3prime end6
PositionCDS
2D Structure