Details of Duplex


2D Structure dot-bracket from RNAduplex"
CAGGGCAGGGAAGGTGGGAGAG&CTCCTATCAAACCTCCCA
..(((.(((...((((((((..&))))))))...)))))).
Details
MiRNAhsa-miR-6879-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site896,914
Score0.846
Seed0
Au0.588
Energy-21.9
Binding len18
Me-14.272
Phylopstem4.720422462499999
Phylopflank4.802915605000001
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end6
PositionCDS
2D Structure