Details of Duplex


2D Structure dot-bracket from RNAduplex"
CAGGGCAGGGAAGGTGGGAGAG&TTCTTCTGACTTCTTTCAGTGCTCTT
.((((((((((((..(((((((&)))))))..))))))....)))))).
Details
MiRNAhsa-miR-6879-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1328,1354
Score0.846
Seed1
Au0.588
Energy-20.0
Binding len26
Me-5.386
Phylopstem2.0932206625
Phylopflank3.4926294550000008
Longest consecutive pairings7
Position of longest consecutive pairings19
Pairings in 3prime end7
PositionCDS
2D Structure