Details of Duplex


2D Structure dot-bracket from RNAduplex"
TACAAGTCAGGAGCTGAAGCAG&CTGCCCAAATAGAAGATTCAAGTGTTGTTAAACCTGCTGGCTGGCTTGA
..((((((...((((..(((((&.))))))))))))))).
Details
MiRNAhsa-miR-6882-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1019,1068
Score0.846
Seed1
Au0.603
Energy-16.2
Binding len17
Me-10.314
Phylopstem6.5968100000000005
Phylopflank4.70636823125
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure