Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTCCCTATCTCACTCTCCTCAG&CTGAGGAAAAGAGTGAAGAAGAAATTGAAATCATAGAAGGGC
..((((.(((((((((((((((&)))))))...))))))...................)))))).
Details
MiRNAhsa-miR-6883-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1787,1829
Score0.923
Seed0
Au0.691
Energy-20.4
Binding len42
Me-6.501
Phylopstem3.7424834459459455
Phylopflank4.4353676775
Longest consecutive pairings7
Position of longest consecutive pairings35
Pairings in 3prime end8
PositionCDS
2D Structure