Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGGGGGCACTGCGCAAGCAAAGCC&GGTATTGATTGTGGAGGTGCATACATTAAACTCCTA
.((((((((((.(((((.(((.(((&))).))).)))))..)))))..........))))).
Details
MiRNAhsa-miR-6885-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site562,598
Score0.885
Seed1
Au0.618
Energy-21.0
Binding len36
Me-7.14
Phylopstem5.0550645
Phylopflank5.42442310125
Longest consecutive pairings5
Position of longest consecutive pairings23
Pairings in 3prime end6
PositionCDS
2D Structure