Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGGGGGGACAGATGGAGAGGACA&TCCTAGAGGATGTGGTTCCTCCTATCAAACCTCCCAA
(((((((...(((((.(((((..&.))))))))))...))))))).
Details
MiRNAhsa-miR-6887-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site878,915
Score0.846
Seed1
Au0.588
Energy-26.3
Binding len22
Me-8.783
Phylopstem6.433125714285715
Phylopflank4.7240892924999995
Longest consecutive pairings10
Position of longest consecutive pairings11
Pairings in 3prime end5
PositionCDS
2D Structure