Details of Duplex


2D Structure dot-bracket from RNAduplex"
AAGGAGATGCTCAGGCAGAT&GTCTTCTGTTCATCTCA
...((((((..((((.((((&))))))))..)))))).
Details
MiRNAhsa-miR-6888-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site152,169
Score0.846
Seed0
Au0.632
Energy-15.7
Binding len17
Me-10.815
Phylopstem2.965426666666667
Phylopflank1.2567104812499998
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end7
PositionCDS
2D Structure