Details of Duplex


2D Structure dot-bracket from RNAduplex"
ATCTGTCTCGATTGTTTCCAG&GTTGAGACGGAA
.(((((((((((.........&))))))))))).
Details
MiRNAhsa-miR-6888-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site196,208
Score0.923
Seed1
Au0.691
Energy-14.9
Binding len12
Me-6.908
Phylopstem1.014022209090909
Phylopflank1.8547464587499998
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure