Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCGGGGAGTCTGGGGTCCGGAAT&TCCACTGGTCGATAATCCTAACTATCAGGGAATCTGGAGTCCTCGAA
(((((((.((((((.(((.((..&.))..))).)))))).))))))).
Details
MiRNAhsa-miR-6889-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1242,1289
Score0.923
Seed1
Au0.632
Energy-24.2
Binding len24
Me-6.987
Phylopstem3.4608225714285714
Phylopflank4.21060345125
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure