Details of Duplex


2D Structure dot-bracket from RNAduplex"
CATGGGGTAGGGCAGAGTAGG&TTGCTTTATGCCAGAGTGGTTTACCCCATT
.(((((((((((((((((((.&))))))..))))........))))))))).
Details
MiRNAhsa-miR-6890-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site2632,2662
Score1.0
Seed1
Au0.676
Energy-20.8
Binding len30
Me-3.793
Phylopstem4.709538034482758
Phylopflank3.4775327612500004
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure