Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGAGGATGGAGAGCTGGGCCAGA&TTTGGCTATGTTTGGGTCTTCTG
.(((((((...((((..(((((((&)))))))..))))..))))))).
Details
MiRNAhsa-miR-6894-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site137,160
Score0.923
Seed1
Au0.632
Energy-19.9
Binding len23
Me-9.15
Phylopstem3.093620428571428
Phylopflank0.9090554312499998
Longest consecutive pairings7
Position of longest consecutive pairings16
Pairings in 3prime end7
PositionCDS
2D Structure