Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGAGGATGGAGAGCTGGGCCAGA&TGTGGTTCCTCCTATCAAACCTCCC
.(((((((((.(((..((((((.(&).)))))))))))))....))))).
Details
MiRNAhsa-miR-6894-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site888,913
Score0.808
Seed1
Au0.588
Energy-19.4
Binding len25
Me-7.587
Phylopstem4.159190053846154
Phylopflank4.709261596250001
Longest consecutive pairings13
Position of longest consecutive pairings10
Pairings in 3prime end7
PositionCDS
2D Structure