Details of Duplex


2D Structure dot-bracket from RNAduplex"
GTGTGGCCGGCAGGCGGGTGG&CTGCCCAAATAGAAGATTCAAGTGTTGTTAAACCTGCTGGCTGGCT
....(((((((.(((((((..&.))))))).)))))))
Details
MiRNAhsa-miR-7108-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1019,1065
Score0.846
Seed0
Au0.618
Energy-25.2
Binding len16
Me-12.893
Phylopstem5.548418142857143
Phylopflank5.0351822875
Longest consecutive pairings7
Position of longest consecutive pairings8
Pairings in 3prime end6
PositionCDS
2D Structure