Details of Duplex


2D Structure dot-bracket from RNAduplex"
ATCCTCTCTTCCCTCCTCCCAG&CTGGGTCAGAGGATGAGATGAA
.((.((((.(((((...(((((&)))))..)).))).)))).)).
Details
MiRNAhsa-miR-7111-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1856,1878
Score0.897
Seed0
Au0.574
Energy-18.6
Binding len22
Me-8.85
Phylopstem3.78661536
Phylopflank4.123382245
Longest consecutive pairings5
Position of longest consecutive pairings17
Pairings in 3prime end5
PositionCDS
2D Structure