Details of Duplex


2D Structure dot-bracket from RNAduplex"
GGCTCAATCTCTGGTCCTGCAGCC&GGCTGCAGATGGTTGGAGATGGAAAATAATGATAGCAAATGCTAATAAGCCT
((((..((((((((((((((((((&))))))))..))))))))))...........................)))).
Details
MiRNAhsa-miR-7158-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1437,1489
Score0.923
Seed0
Au0.632
Energy-25.0
Binding len52
Me-9.958
Phylopstem5.40113635
Phylopflank2.560643345
Longest consecutive pairings10
Position of longest consecutive pairings32
Pairings in 3prime end8
PositionCDS
2D Structure