Details of Duplex


2D Structure dot-bracket from RNAduplex"
GAGGGCAGAGCCAGCTTCCTGA&AGGAAGCCTCCTAGAGGATGTGGTTCCTCCTATCA
(((((..(((((((((((((..&))))))).............))))))..))).)).
Details
MiRNAhsa-miR-7843-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site870,905
Score0.846
Seed0
Au0.559
Energy-20.7
Binding len35
Me-7.382
Phylopstem5.15192226923077
Phylopflank4.6940850475
Longest consecutive pairings7
Position of longest consecutive pairings28
Pairings in 3prime end6
PositionCDS
2D Structure