Details of Duplex


2D Structure dot-bracket from RNAduplex"
AAGGGACAGGGAGGGTCGTGG&CCAGACCTGAACTTTAATCAGTCTGCACATCCTGTTTCTA
.(((((((((..(((((.(((&))))))))......................))))))))).
Details
MiRNAhsa-miR-7845-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site2014,2054
Score0.923
Seed1
Au0.647
Energy-19.0
Binding len40
Me-9.965
Phylopstem2.5264666666666664
Phylopflank3.5442483200000003
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure