Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTCCCAGCCAACGCACCA&GGAGAAGTATATTTTGCAGAAACTTTTGATAGTGGAAGGTTGGCTGGA
...(((((((((...(((&.)))...))))))))).
Details
MiRNAhsa-miR-7977
RefseqIDNM_004362
GeneSymbolCLGN
Binding site292,340
Score0.923
Seed0
Au0.632
Energy-20.9
Binding len17
Me-9.396
Phylopstem3.090123333333333
Phylopflank2.4920297212499993
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure