Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCTGGTGTATAGCGTTGCTCA&AGTTGCTTTATGCCAGAG
(((((((((.((((..(((..&))))))).))))))))).
Details
MiRNAhsa-miR-7978
RefseqIDNM_004362
GeneSymbolCLGN
Binding site2630,2648
Score1.0
Seed1
Au0.706
Energy-16.8
Binding len18
Me-6.149
Phylopstem4.2607170000000005
Phylopflank4.2479555675
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure