Details of Duplex


2D Structure dot-bracket from RNAduplex"
GGCTGAGTGGGGTTCTGACTCC&GAGTGGTTTACCCCATTCAC
...((((((((((....((((.&)))).....)))))))))).
Details
MiRNAhsa-miR-8077
RefseqIDNM_004362
GeneSymbolCLGN
Binding site2645,2665
Score0.846
Seed0
Au0.662
Energy-21.5
Binding len20
Me-8.34
Phylopstem5.0646348
Phylopflank3.700843961249999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure