Details of Duplex


2D Structure dot-bracket from RNAduplex"
CAGTGATCGTCTCTGCTGGC&GCGGGGACCAAGTGGCAACGACTTGGACATCTGAGCTGTCACTGC
(((((((.((((((((....&)))))))).............................))))))).
Details
MiRNAhsa-miR-8079
RefseqIDNM_004362
GeneSymbolCLGN
Binding site46,91
Score0.846
Seed1
Au0.5
Energy-17.5
Binding len45
Me-6.251
Phylopstem0.7268636249999999
Phylopflank0.35551774083333343
Longest consecutive pairings8
Position of longest consecutive pairings37
Pairings in 3prime end4
Position5UTR
2D Structure