Details of Duplex


2D Structure dot-bracket from RNAduplex"
CAGTGATCGTCTCTGCTGGC&AGTAGCAGATCACTGG
((((((((....(((((...&)))))..)))))))).
Details
MiRNAhsa-miR-8079
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1422,1438
Score0.846
Seed1
Au0.603
Energy-17.3
Binding len16
Me-12.408
Phylopstem2.2182825
Phylopflank2.9545917325
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure