Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGGGAGAGAGGACTGTGAGGC&GCCTCCTAGAGGATGTGGTTCCTCCTATCAAACCTCCCAA
((((((.((((((((.(((((&))))).)))..........))))).........)))))).
Details
MiRNAhsa-miR-8085
RefseqIDNM_004362
GeneSymbolCLGN
Binding site875,915
Score0.923
Seed0
Au0.588
Energy-21.8
Binding len40
Me-5.714
Phylopstem4.5208105
Phylopflank4.612571956249999
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure