Details of Duplex


2D Structure dot-bracket from RNAduplex"
GAAGACTTCTTGGATTACAGGGG&CCCTTGATAGTTCAATATGAAGTAAATTTTCA
(((((((((((((((((((((((&)))))).))))))))...)))))....)))).
Details
MiRNAhsa-miR-8087
RefseqIDNM_004362
GeneSymbolCLGN
Binding site526,558
Score0.846
Seed1
Au0.676
Energy-19.7
Binding len32
Me-3.938
Phylopstem5.6853124193548386
Phylopflank5.706284125
Longest consecutive pairings8
Position of longest consecutive pairings17
Pairings in 3prime end8
PositionCDS
2D Structure