Details of Duplex


2D Structure dot-bracket from RNAduplex"
CCTGGGGACAGGGGATTGGGGCAG&CTGCCGTCAAACCAGAAGACTGGGATGAAAGTGAACCTGCCCA
....(((.((((((.(((((((((&))))).)))).))......................))))))).
Details
MiRNAhsa-miR-8089
RefseqIDNM_004362
GeneSymbolCLGN
Binding site983,1026
Score0.846
Seed0
Au0.574
Energy-21.0
Binding len43
Me-12.596
Phylopstem4.9536937
Phylopflank5.17509121875
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure