Details of Duplex


2D Structure dot-bracket from RNAduplex"
CCTGGGGACAGGGGATTGGGGCAG&TGTTTGGGTCTTCTGTTCA
.....((((((((((((.(((((.&))))).)))))))))))).
Details
MiRNAhsa-miR-8089
RefseqIDNM_004362
GeneSymbolCLGN
Binding site145,164
Score1.0
Seed0
Au0.647
Energy-21.5
Binding len19
Me-13.666
Phylopstem1.807540333333333
Phylopflank1.13207811375
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure