Details of Duplex


2D Structure dot-bracket from RNAduplex"
TACTTACCTGTCCCCTACCCCA&TGGGAGGCACCTCAGATTCTTAATCCAGCATGTCGGATTGGGTGTGGTGAGTGG
((((((((...(((...((...&.))...)))...)))))))).
Details
MiRNAhsa-miR-9898
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1141,1195
Score1.0
Seed1
Au0.574
Energy-17.5
Binding len21
Me-10.03
Phylopstem3.1454565
Phylopflank3.727396057500001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure