Details of Duplex


2D Structure dot-bracket from RNAduplex"
CGGGCGCCGCGCTCCCGCCCGC&GCGGCCGCCGGCGGGACTGGTCTGAAGAGACGCGGGGACCA
..(((.(((((((((((((.((&.)).)))))))............).))))).).)).
Details
MiRNAhsa-miR-9899
RefseqIDNM_004362
GeneSymbolCLGN
Binding site15,56
Score0.846
Seed0
Au0.353
Energy-29.2
Binding len36
Me-6.858
Phylopstem0.3679691423076923
Phylopflank0.3187009404166667
Longest consecutive pairings7
Position of longest consecutive pairings25
Pairings in 3prime end7
Position5UTR
2D Structure