Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTATCCTCCAGTAGACTAGGGA&GGTTGGCTGGATGGGTC
..((((((((((.((((.....&)))).)))))).)))).
Details
MiRNAhsa-miR-9903
RefseqIDNM_004362
GeneSymbolCLGN
Binding site329,346
Score0.846
Seed1
Au0.588
Energy-16.7
Binding len17
Me-6.246
Phylopstem3.890117818181818
Phylopflank2.2034491625
Longest consecutive pairings6
Position of longest consecutive pairings6
Pairings in 3prime end3
PositionCDS
2D Structure