Details of Duplex


2D Structure dot-bracket from RNAduplex"
CGGCGGCGGCGGCTCTGGGCG&CGCGGGGACCAAGTGGCAACGACTTGGACATCTGAGCTGTCACTGCCGA
((((((.((((((((.(((..&.))))))))))).)))))).
Details
MiRNAhsa-miR-10400-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site45,94
Score1.0
Seed0
Au0.529
Energy-26.7
Binding len20
Me-5.714
Phylopstem0.831602
Phylopflank0.3940926941025641
Longest consecutive pairings11
Position of longest consecutive pairings8
Pairings in 3prime end5
Position5UTR
2D Structure