Details of Duplex


2D Structure dot-bracket from RNAduplex"
CGTGTGGGAAGGCGTGGGGT&ACCCCATTCACAAAATTTCTTATGCA
.((((((((((..(((((((&)))))))........)))))))))).
Details
MiRNAhsa-miR-10401-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site2654,2680
Score0.846
Seed1
Au0.706
Energy-17.7
Binding len26
Me-8.429
Phylopstem2.5763124
Phylopflank3.5269803612499993
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure