Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTCGCCGTCCCGCCCGCCG&CGGCCGCCGGCGGGACTGGTCTGAAGAGACGCGGGGA
.((((((.((((((((.((((&))))....))))))))..............)))))).
Details
MiRNAhsa-miR-10401-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site16,53
Score1.0
Seed1
Au0.324
Energy-29.4
Binding len37
Me-6.107
Phylopstem-0.015826087500000086
Phylopflank0.36544763321428575
Longest consecutive pairings8
Position of longest consecutive pairings21
Pairings in 3prime end7
Position5UTR
2D Structure