Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGAGGAGGAGGTCAGGC&TCTGACTTCTTTCA
....(((((((((((((.&))))))))))))).
Details
MiRNAhsa-miR-11181-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1332,1346
Score0.846
Seed0
Au0.618
Energy-18.3
Binding len14
Me-9.547
Phylopstem2.3433468923076926
Phylopflank3.5790838600000003
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure