Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTCAGGTCTGGGGCTGAAACCT&AGGGATGTTTGGCATTGTAAAAATCAGCATGCCAGACCTGAAC
(((((((((((.(((((.....&.)))))...))))))))))).
Details
MiRNAhsa-miR-11399
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1983,2026
Score0.923
Seed1
Au0.618
Energy-26.8
Binding len21
Me-7.284
Phylopstem3.5004203636363638
Phylopflank3.3642132350000002
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure