Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTCAGGTCTGGGGCTGAAACCT&CAGCCCTGGAAAAACCAATGGACCTGGAA
((((((((((((((((......&)))))))............))))))))).
Details
MiRNAhsa-miR-11399
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1703,1732
Score0.962
Seed1
Au0.588
Energy-24.5
Binding len29
Me-3.938
Phylopstem3.432821446428572
Phylopflank3.8764307000000002
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure