Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCGGCTGTGTATCTCTGTGTC&GACGCGGGGACCAAGTGGCAACGACTTGGACATCTGAGCTGTCACTGCCGAA
(((((.(((((((((((((((&)))))))))).............................)).))).))))).
Details
MiRNAhsa-miR-11400
RefseqIDNM_004362
GeneSymbolCLGN
Binding site43,95
Score0.923
Seed0
Au0.515
Energy-22.3
Binding len52
Me-5.839
Phylopstem0.5487020400000002
Phylopflank0.3565562678787878
Longest consecutive pairings10
Position of longest consecutive pairings42
Pairings in 3prime end8
Position5UTR
2D Structure