Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCACGTCTGCGGCTGTCACG&TGGCAGCTGCTGAAGGGCA
....((((((((((((((..&))))))))))....)))).
Details
MiRNAhsa-miR-11401
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1508,1527
Score0.846
Seed0
Au0.574
Energy-20.0
Binding len19
Me-9.547
Phylopstem3.6843003333333337
Phylopflank3.15460816
Longest consecutive pairings10
Position of longest consecutive pairings9
Pairings in 3prime end6
PositionCDS
2D Structure