Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCACGTCTGCGGCTGTCACG&GGCTGCAGATGG
...(((((((((((......&))))))))))).
Details
MiRNAhsa-miR-11401
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1437,1449
Score1.0
Seed0
Au0.574
Energy-19.5
Binding len12
Me-7.483
Phylopstem5.083363
Phylopflank2.4856056450000006
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure