Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGTGCCATTCTGAGGGCCAGGAGT&CCTGGTGTATTAAAACAGTTAATGGCAGCTG
((.((((((((((.(.((((((...&)))))).).......)))..))))))).)).
Details
MiRNAhsa-miR-3085-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1486,1517
Score0.846
Seed0
Au0.559
Energy-22.5
Binding len31
Me-6.585
Phylopstem2.6247379166666662
Phylopflank3.22504044
Longest consecutive pairings7
Position of longest consecutive pairings4
Pairings in 3prime end5
PositionCDS
2D Structure