Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGTGCCATTCTGAGGGCCAGGAGT&GCTCTTGGTTTAGAGCTTTGGTCTATGACCTC
((((((((((((((..(((((((((&)))))))))))))))...)))).....)))).
Details
MiRNAhsa-miR-3085-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1348,1380
Score0.923
Seed1
Au0.676
Energy-22.5
Binding len32
Me-4.906
Phylopstem3.7360927999999998
Phylopflank3.0349875975
Longest consecutive pairings15
Position of longest consecutive pairings17
Pairings in 3prime end8
PositionCDS
2D Structure