Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGTGCCATTCTGAGGGCCAGGAGT&CCTGGTGACAGAGGACTGGTATTA
.((((((((((((...((((((...&))))))..)))))...))))))).
Details
MiRNAhsa-miR-3085-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site436,460
Score0.846
Seed1
Au0.603
Energy-22.0
Binding len24
Me-5.619
Phylopstem2.61271836
Phylopflank3.8708065912499983
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure