Details of Duplex


2D Structure dot-bracket from RNAduplex"
TAGTGGAGCTGGGAGGCAGCTCGG&TGGAGGTGCATACATTAAACTCCTAGCAGACACTGA
(((((..(((((((((((.(((.(&).))).)))..........))))))))...))))).
Details
MiRNAhsa-miR-12115
RefseqIDNM_004362
GeneSymbolCLGN
Binding site573,609
Score0.846
Seed0
Au0.647
Energy-26.0
Binding len36
Me-7.382
Phylopstem5.387085238095238
Phylopflank5.561910223750001
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end6
PositionCDS
2D Structure